Occupancy modelling using HMMs

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• Royle, Kéry (2007), A Bayesian state-space formulation of dynamic occupancy models​, Ecology

• Gimenez, Blanc, Besnard, Pradel, Doherty , Marboutin, Choquet (2014), Fitting occupancy models with E-SURGE: hidden Markov modelling of presence–absence data, Methods in Ecology and Evolution

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