Movement modelling using HMMs (methods)

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• Morales, Haydon, Frair, Holsiner, Fryxell (2004), Extracting more out of relocation data: building movement models as mixtures of random walks, Ecology

• Holzmann, Munk, Suster, Zucchini (2006), Hidden markov models for circular and linear-circular time series, Environmental and Ecological Statistics

• Patterson, Basson, Bravington, Gunn (2009), Classifying movement behaviour in relation to environmental conditions using hidden Markov models, Journal of Animal Ecology

• Langrock, King, Matthiopoulos, Thomas, Fortin, Morales (2012), Flexible and practical modeling of animal telemetry data: hidden Markov models and extensions, Ecology

• Patterson, Parton, Langrock, Blackwell, Thomas, King, (2016), Statistical modelling of animal movement: a myopic review and a discussion of good practice, arXiv

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Movement modelling using HMMs (applications)

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• Franke, Caelli, Hudson (2004), Analysis of movements and behavior of caribou (Rangifer tarandus) using hidden Markov models, Ecological Modelling

• McKellar, Langrock, Walters, Kesler (2015), Using mixed hidden Markov models to examine behavioral states in a cooperatively breeding bird, Behavioral Ecology

• van de Kerk, Onorato, Crield, Bolker, Augustine, McKinley, Oli (2015), Hidden semi-markov models reveal multiphasic movement of the endangered florida panther, Journal of Animal Ecology

• Towner, Leos-Barajas, Langrock, Schick, Smale, Jewell, Kaschke, Papastamatiou (2016), Sex-specific and individual preferences for hunting strategies in white sharks, Functional Ecology

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